Published Data Sets

Original Paper Authors Date Description Cell Atlas
Host cell maturation modulates parasite invasion and sexual differentiation in Plasmodium berghei Franziska Hentzschel et al. 2022 Apr Plasmodium berghei Differentiation in the Erythropoietic Niches.
Single cell transcriptomic analysis of bloodstream form Trypanosoma brucei reconstructs cell cycle progression and differentiation via quorum sensing Emma M. Briggs et al. 2021 Sep Trypanosoma brucei Blood Stages.
Single-cell transcriptomics reveals expression profiles of Trypanosoma brucei sexual stages Virginia M Howick et al. 2022 Mar Trypanosoma brucei Sexual Stages.
Beta2 integrins differentially regulate γδ T cell subset thymic development and peripheral maintenance Claire L. McIntyreet al. 2020 Aug Role of CD18 in γδ T cells.
Tuft Cells Increase Following Ovine Intestinal Parasite Infections and Define Evolutionarily Conserved and Divergent Responses Katie A. Hildersley et al. 2021 Nov Sheep abomasal epithelium following parasitic nematode (worm) infection.
Distinct synovial tissue macrophage subsets regulate inflammation and remission in rheumatoid arthritis Stefano Alivernini et al. 2020 Jun Phenotypic Spectrum of Synovial Tissue Macrophage during Development and Resolution of Rheumatoid Arthritis.
Integrative single cell and spatial transcriptomic analysis reveal reciprocal microglia-plasma cell crosstalk in the mouse brain during chronic Trypanosoma brucei infection Juan Quintana et al. 2022 Sep Single Cell transcriptomic analysis in the mouse brain during chronic Trypanosoma brucei infection.
Profiling the bloodstream form and procyclic form Trypanosoma brucei cell cycle using single-cell transcriptomics Emma M. Briggs et al. 2023 May Trypanosoma brucei cell cycle.